Xplor-NIH home Documentation |
Next: Requirements Up: Chemical Shift Anisotropy Restraint Previous: Chemical Shift Anisotropy Restraint
Syntax
DCSA {<Chem-Shift-Anis-statement>} END <DCSAnisotropy-statement>:== ASSIgn <selection> <selection> <selection> <selection> <selection> <selection> <selection> <real> <real> <real> {* atom i atom j atom k atom l ! atom m atom n atom o ! CSA-obs CSA-err-min CSA-err-plus *} {* atom i = center, atom j = Z, atom k = X, atom l = Y *} {* if TYPE=PHOS atom m define the phosphorus atom *} {* atom n and o define the o1p and o2p *} {* if TYPE=CARB atom m define the carbonyl atom *} {* atom n and o define the oxygen and nitrogen(i+1) *} {* if TYPE=NITR atom m define the carbonyl atom (i-1) *} {* atom n and o define the nitrogen and NH *} {* The unit for CSA in the constraint file is ppb *} CLASsification <name> ! Starts a new class. Applies to all ! ASSIgn , TYPE, and FORCe entries until ! another CLASS entry is issued. SCALe <real> for normalizing the alignment tensor {* Use the static dipolar coupling (in Hz) for the nuclei ! used to calculate Da ! DNH(r=1.04A) = 21652.1 ; DCH (r=1.08A) = 47965.1 *} TYPE <PHOS | CARB | NITR> ! type of CSA COEFficient <real> <real> <real> coef: <DFS> <Da in Hz> <rhombicity> SIGMa <real> <real> <real> sigma <s11> <s22> <s33> in ppm ! for 15N -108.5 45.7 62.8 ! for 13C' -74.7 -11.8 86.5 ! for 31P in nucleic acids 19.67 -99.33 79.67 FORCeconstant <real> ! force constant for all ! assignments in the current class. {default = 50} NREStraints <integer> ! number of slots for CSAnisotropy ! restraints to allocate in memory {default = 200} POTEntial <SQUAre | HARMonic> ! whether to use CSA-err or not PRINt THREshold <real> ! prints CSAnisotropy violations ! greater than the specified value RESEt ! erases the CSA. assignment table, but keeps ! NREStraints the same.
Xplor-NIH 2024-09-13